ManufacturingIntermediate12 min read

Cell Therapy Manufacturing Protocols: A Practical Guide

Essential protocols and best practices for GMP-compliant cell therapy manufacturing.

Published: January 7, 2026Updated: January 7, 2026

Introduction

This guide covers the fundamental protocols required for GMP-compliant cell therapy manufacturing, from facility setup to release testing.

Note: All protocols should be validated for your specific cell type and indication.

Facility Requirements

Cleanroom Classifications

Cell therapy manufacturing typically requires:

  • Grade A/B for open processing
  • Grade C/D for closed system operations
  • Appropriate airflow and pressure differentials

Environmental Monitoring

Continuous monitoring is essential for maintaining GMP compliance:

  1. Particle counts (viable and non-viable)
  2. Temperature and humidity logging
  3. Pressure differential alarms
  4. Personnel gowning verification

Cell Processing Protocols

Isolation and Expansion

The core steps for most autologous therapies include:

  1. Patient material receipt and inspection
  2. Cell isolation (density gradient, immunomagnetic selection)
  3. Culture initiation and expansion
  4. Harvest and formulation
  5. Cryopreservation or fresh release
Critical: Maintain chain of identity throughout processing. Label verification at each step is mandatory.

Media and Reagent Management

All media and reagents must be:

  • GMP-grade or equivalent qualification
  • Received with certificates of analysis
  • Stored per manufacturer specifications
  • Used within validated shelf life

Quality Control Testing

In-Process Controls

Control Point Test Frequency
Day 0 Cell count, viability Each batch
Mid-culture Sterility sample Each batch
Pre-harvest Phenotype check Each batch

Release Testing Panel

Test Method Acceptance Criteria
Sterility USP <71> No growth at 14 days
Endotoxin LAL <5 EU/mL
Mycoplasma PCR Negative
Identity Flow cytometry >70% target phenotype
Viability Trypan blue >70% viable
Potency Functional assay Product-specific

Documentation Requirements

Batch Records

Every manufacturing run requires:

  • Pre-approved batch production record
  • Real-time documentation of all steps
  • Deviation reporting and investigation
  • Final review and release
Best Practice: Document everything in real-time. Retrospective documentation increases error risk and regulatory scrutiny.

Change Control

Any modification to validated processes requires:

  1. Change request submission
  2. Impact assessment
  3. Approval by Quality Assurance
  4. Implementation and verification
  5. Documentation update

Summary

Implementing robust protocols is the foundation of successful cell therapy manufacturing. Key takeaways:

  • Facility design must support your product requirements
  • Process controls ensure consistency batch-to-batch
  • Quality testing confirms product safety and efficacy
  • Documentation provides the evidence trail regulators require

For assistance implementing these protocols in your facility, contact our consulting team.

Need Help Implementing These Protocols?

Our team of cell therapy manufacturing experts can help you develop, validate, and optimize your protocols for GMP compliance.

Schedule a Consultation